I received the B.E. degree at China University of Petroleum (Beijing) in 2020, received the M.Eng. degree at Jiangnan University in 2023, supervised by Prof. Shouyu Wang. Now I am pursuing my Ph.D. degree in Fudan University, Shanghai since 2023, supervised by Prof. Biqin Dong.

My research interest includes Data-driven Neural Imaging and Intelligent Biomedical Engineering. I have published more than 10 papers at the peer reviewed journals with total.

🔥 News

08/2024: 🎉🎉 Attend Cold Spring Harbor Laboratory-Asia (CSHA) Summer School: Data Science for Large-Scale Imaging of Neuronal Activity. (Only 16 people are selected globally)
01/2023: 🎉🎉 Join Dong Lab @Fudan.

📝 Publications

Super Resolution Reconstruction of Fluorescence Microscopy Image by Convolutional Network with Physical Priors. Qiangyu Cai, Jun Lu, Wenting Gu, Di Xiao, Boyi Li, Lei Xu, Yuanjie Gu, Biqin Dong* & Xin Liu* (2024). Biomedical Optics Express, Accepted.
Deep-learning-assisted spectroscopic single-molecule localization microscopy based on spectrum-to-spectrum denoising. Dandan Xu, Yuanjie Gu, Jun Lu, Lei Xu, Wei Wang & Biqin Dong* (2024). Nanoscale, 16(11), 5729-5736.
IEEE J-BHISegCoFusion: An Integrative Multimodal Volumetric Segmentation Cooperating with Fusion Pipeline to Enhance Lesion Awareness. Yuanjie Gu#, Yinghan Guan#, Zekuan Yu & Biqin Dong* (2023). IEEE Journal of Biomedical and Health Informatics, 27(12), 5860-5871.
Physics Driven Deep Retinex Fusion for Adaptive Infrared and Visible Image Fusion. Yuanjie Gu, Zhibo Xiao, Yinghan Guan, Haoran Dai, Cheng Liu, Liang Xue & Shouyu Wang* (2023). Optical Engineering, 62(8), 083101. 😄 Promotion on the SPIE WeChat account.
Deep SBP+: breaking through the space-bandwidth product limit based on a physical-driven cycle constraint framework. Zhibo Xiao#, Yuanjie Gu#, Lin Zhu, Cheng Liu & Shouyu Wang* (2023). Journal of the Optical Society of America A, 40(5), 833-840.
Optica OLDeep-Gamma: deep low-excitation fluorescence imaging global enhancement. Zhibo Xiao, Yinghan Guan, Ying Jin, Wei Hou, Yuanjie Gu* & Shouyu Wang* (2023). Optics Letters, 48(9), 2496-2499.
Optica OLDeep low-excitation fluorescence imaging enhancement. Yuanjie Gu, Zhibo Xiao, Wei Hou, Cheng Liu, Ying Jin & Shouyu Wang* (2022). Optics Letters, 47(16), 4175-4178.
Deep fusion prior for plenoptic super-resolution all-in-focus imaging. Yuanjie Gu, Yinghan Guan, Zhibo Xiao, Haoran Dai, Cheng Liu & Shouyu Wang (2022). Optical Engineering, 61(12), 123103.
OpenRefocus: an open-source Qt-based tool for light field parallel refocusing. Yuanjie Gu, Miao Yu, Lingyu Ai, Zhilong Jiang, Xiaoliang He, Yan Kong & Shouyu Wang* (2022). Optical Engineering, 61(6), 063108-063108.
Automatic whole blood cell analysis from blood smear using label-free multi-modal imaging with deep neural networks. Chao Chen, Yuanjie Gu, Zhibo Xiao, Hailun Wang, Xiaoliang He, Zhilong Jiang, Yan Kong, Cheng Liu, Liang Xue, Javier Vargas, Shouyu Wang (2022). Analytica Chimica Acta, 1229(340401).
Optica OLREPAID: resolution-enhanced plenoptic all-in-focus imaging using deep neural networks. Miao Yu#, Yuanjie Gu#, Zhilong Jiang, Xiaoliang He, Yan Kong, Cheng Liu & Shouyu Wang* (2021). Optics Letters, 46(12), 2896-2899.

🎖 Honors and Awards

10/2024, National Bronze Award of China International College Students’ Innovation Competition (CICSIC 24).
09/2024, Gold Award of China International College Students’ Innovation Competition (CICSIC 24), Shanghai Division.
02/2019, Meritorious winner of American Mathematical Contest in Modeling, COMAP.

📖 Educations

09/2023 - now, Biomedical Engineering, Fudan University.
09/2020 - 06/2023, Optical Engineering, Jiangnan University.
09/2016 - 06/2020, Software Engineering, China University of Petroleum (Beijing).

💬 Academic Activities

10/2024 - now, Young Editorial Board Member of Advanced Technology in Neuroscience.
11/2024 - now, Reviewer of Biomedical Signal Processing and Control.
11/2023 - now, Reviewer of IEEE Signal Processing Letters.

💻 Internships